Very nice looking weapon.
You shouldn't have any problems threading the barrel though as far as I know. Most of these milled versions never had any existing threads to begin with so the OD is still true, unlike some of the stamped versions that had the threads turned off prior to resale. Even these though have safe options for rethreading... let me know if you would like some more information and I can try to get it for you.
The holes on the side were probably for an external scope mount of some sort. Do a google image search for "polytech scope mount" and you will see what I am talking about.
Also, one additional thing you can check just to see on your rifle is if it has a spring loaded firing pin or not. Doesn't really make a difference either way, but the "mil-spec" requires the spring loaded option and some of these milled versions have them and some do not. The end of the bolt will have a rounded "button" the hammer strikes versus a small "slot". You may know this already, but if not... there ya go!