A "regular" bore site kit will not work due to the increased height of an AR sight set over the bore as opposed to the non-AR type rifle. Offset spuds are available, but I haven't found them to be very reliable.
I currently use two types of laser bore sites. One is the LaserLyte. It has a tapered shaft with a set of mutli-cal tips that screw onto the end one inserts in the bore. Select the proper size tip, attach it to the device, insert the unit in the bore, turn on the laser and start lining things up. A word of warning, the best this unit does is get you windage close. The laser is direct and your line of sight is direct. If you try to set elevation, you can make the two points meet, but you still have to estimate elevation. Most of the time, I will be on the paper at 50yds (min range at the range I shoot at).
www.laserlyte.com/Another device is available that also uses a laser, but it is more expensive. The AimShot laser unit is used in conjunction with different inserts, each in the specific caliber of the chamber (not just bore diameter).
www.aimshot.com/NOTE: Bore sighting is a WAG aided by a tool. A trip to the range is required to get things truley in line. Good luck.