Flash suppressors, or muzzle threads at least do two things from a mechanical point of view.
First, by turning down and threading the end of the barrel, there are enormous forces being put on it. It is possible that reducing the diameter of the barrel can cause the bore to expand ever so slightly and threading does not help matters.
Second, is the torque from the muzzle device. Many highpower shooters will time the suppressor with a peel washer and then put some blue Loctite on the threads to keep it in place, thus putting a very small amount of torque on the terminal end of the barrel. Torquing up a crush washer, again, puts some pretty serious stress on the barrel.
All of this is from a pure accuracy standpoint. Most ARs are not accurate enough to notice it, but if you stack up enough variables, something will bite you in the ass sooner or later.