Quite a few cars today are going to aluminum blocks & heads, so I would doubt you would need much of a caliber to mess one up. I would be safe to say that 7.62x51 ball could ruin most engines by either penetrating thin areas of iron blocks or aluminum blocks, as well as the other systems like radiator, fuel, oil lines, electrical, computers and such. It may not stop one dead, but the car will crap out soon. Going with AP rounds in any caliber would help.
On a side note, I can say first hand, that 180gr 8mm Mauser, M2 ball .30-06, and M80 7.62 NATO will NOT go all the way through a Toyota torque converter at 50yds even after many shots. It was ruined and all of the fluid drained out but the hard metal inside was just too strong for regular FMJ rounds. The 8mm mauser round went right through a cast iron control arm though.