http://www.we-todd-did-racing.com/wetoddimage.wtdr/wMTA2MDY4NTZzNDEzZGZkMzF5NTQx.jpg1988 Wrangler
3 inch BDS suspension lift
1.5 inch extended shackles
Rubicon Express sway bar disconnects
front and rear differential rock sliders
Detroit Locker locking differential in the rear
Tom Wood's custom rear driveshaft
BDS Rock Lock front axle cable driven actuator
4.11 ring and pinion in both axles
33x12.5 inch Super Swamper Bogger tires
15x10 inch American Racing wheels
PIAA 520 lights mounted on the windshield
Hella 500 lights mounted on the front brush guard
Quite a few other goodies. I used this thing off road all the time when I had it. From mudding to rock crawling and everything in between, the thing never would break. It would get up to right at 65 MPH before running out of pep in 5th gear (speedometer corrected by replacing the speedo gear).
You'll find that the worst part about your Jeep will be the rear axle's C-Clips. They make the Dana 35 very easy to break. A cheap solution would be to find a pre-1991 Dana 35 axle. A lot of people will tell you that the D35 is a weak axle, but if you are only pushing the power of a 4 cylinder through it, you don't need that much, and many people get rid of thiers in order to go with something stronger for a stronger motor. A Dana 35 will do you just fune.
Oh, and the Jeep had over 230,000 miles on it when I sold it in great running condition.
Spring over conversions are usually more expensive than you would expect. Once you get everything you need, you'll realize that you need about twice as much to make it work right. Oh, and the stock YJ springs usually aren't worth a damn after about 100,000 miles, especially if you are altering the geometry of the wheels / axle / drivetrain. A true suspension lift will do you better, and provide you with all new hardware / bushings / shocks. Decent shocks will be hard to find for a spring over, especially ones that will be properly valved for on-road use. I agree with you, though. Body lifts are a total waste.
Look into the BDS lifts. They are great and some of the cheapest you will find on the market.