I surely don't like to see a post when someone shortens a die body, it's almost never needed to size the case body a little farther down. Whether the lead in chamfer or radius at the entrance to the die is a good idea is for another discussion.
Look at the shell holder, case, and die interaction. The top surface of the shell holder can be thinned several thousandths to accomplish the same end. Shell holders are $8, dies are obnoxiously expensive.
If you have several shell holders of the same size, measure the dimension from the "bolt face" to the top surface of the holder. You'll find out that they are all different, and generally I've found most of the difference is in the thickness of the top flange. Also if you have several shell holders, try all of them before modifying anything, you might have one with tolerance buildup in the direction favorable to correct your problem.