I've found that freshly fired (meaning today) brass, if deprimed and thrown directly into untreated walnut for a three hour vibratory tumble will come out clean, including primer pockets. If left overnight it usually won't. It seems as though the carbon hardens with the passage of time, old brass is the hardest to get clean.
For everything a person does there are consequences. This is true for reloding techniques along with everything else. If I decide to knock the primers out and tumble my brass prior to resizing, I just added another unecessary step. It consumes time and energy, the thing that life is made of. I do it anyway because I like the crud addressed by the vibrating tumbler before I get a look at it.
There is nothing wrong with tumbling with the primer intact. It will get knocked out when resized and the tumbler will have a little time with it while you tumble off the lube. The only down side to this method is that cruddiest coursest stuff in the case ends up all over your press. Including your ram, shell holder and possibly your dies. Make sure you wipe it down as the evening proceeds so it doesn't get a chance to take over.
I like the way a primer seats in a clean primer pocket. You can feel the difference. Primers seated in dirty pockets will shoot just fine so long as they are sitting all the way to the bottom.
This all ends up being a personal decision based on what's important to you. I have no information to back me up, but I always felt better about long term storage of completely cleaned brass over anything less than that.