Quoted:
Have a FA lower machined from an 80%. All pin hole locations are in spec.
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I beg to differ, in that if all pin hole locations were actually in spec, it'd run properly.
Most of your timing differences come from use of a DIAS, with different (non-military) uppers, whose takedown pin post dimensions can vary a lot, since it's not a critical dimension for a registered full-auto receiver or a semi-auto receiver, but the DIAS dimensions index on the post dimensions. This leads to shimming or trimming to get the DIAS in time.
A properly-located RR full-auto sear, in a properly-dimensioned FCG well, with properly-located hammer and trigger pin holes won't have those timing problems. If you've got a factory RR to compare to your 80%, you can try lining things up with transfer pin punches to see which holes are off, by how much, and in which direction(s).